The detailed information of tRNA gene sequence


Sequence ID>A171001574
Genome IDCP002062
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus jeotgali B3 [CP002062]
Start position on genome 1626317
End posion on genome 1626401
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caacgcccgc
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCCAATGCGCCTGCCTTGAGAGCAGGTGTCCGAGAGGACTCA
TGGGTTCAAATCCCATCCCCACCGCtt
Downstream region at tRNA end position 
ttccggcaac
Secondary structure (Cloverleaf model)
>A171001574	Ser	TGA
                   c      GCtt ttccggcaac
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       A T G G G     C
    G         | | |                 T T
    C       A T G C
      C C A        G     TGTCCGAGAGGACTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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