The detailed information of tRNA gene sequence


Sequence ID>A171001594
Genome IDCP002062
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus jeotgali B3 [CP002062]
Start position on genome 1761080
End posion on genome 1761007
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tgatgagcga
tRNA gene sequence 
GGGCCGGTAGCTCAGTCCGGCAGAGCGTCTGGCTTTTAACCAGACGGTCGCGTGTTCGAA
TCGCGCCCGGCCCGttt
Downstream region at tRNA end position 
tcacgacgag
Secondary structure (Cloverleaf model)
>A171001594	Lys	TTT
                   a      Gttt tcacgacgag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C G C     A
      T G A        A      | | | + |     G
    C       C T C G       G C G T G     C
    C       | | | |                 T T
    G       G A G C
      G C A        G     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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