The detailed information of tRNA gene sequence


Sequence ID>A171001655
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1171029
End posion on genome 1171121
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gtcttgaata
tRNA gene sequence 
GGGCCCGTAGCTCAGCTAGGTAGAGCGGCGGGCTTTTAACCCGTAGAACTGAGGGTGCGG
AAGTCCCGGGTTCAAATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
caaattctaa
Secondary structure (Cloverleaf model)
>A171001655	Lys	TTT
                   a      GCCA caaattctaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGAACTGAGGGTGCGGAAGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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