The detailed information of tRNA gene sequence


Sequence ID>A171001656
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1171199
End posion on genome 1171274
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aattatattA
tRNA gene sequence 
GCCGCCGTAGCTCAGCTCGGTAGAGCGCTGGCCTCGTAAGCCAGTGGTCGCGGGTTCAAA
TCCCGCCGGCGGCTTta
Downstream region at tRNA end position 
atgatatctt
Secondary structure (Cloverleaf model)
>A171001656	Thr	CGT
                   A      TTta atgatatctt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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