The detailed information of tRNA gene sequence


Sequence ID>A171001662
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1740608
End posion on genome 1740686
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttcttaacaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGACTAGAGCGCCGGCCTTCGGAGCCGGTGGTCGGGGGTTCA
AATCCCCTCGGGCCCGCCA
Downstream region at tRNA end position 
tatataaaat
Secondary structure (Cloverleaf model)
>A171001662	Arg	TCG
                   a      GCCA tatataaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C C G A        A      + | | | |     A
  A         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A C T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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