The detailed information of tRNA gene sequence


Sequence ID>A171001663
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1843980
End posion on genome 1844058
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaatgctttg
tRNA gene sequence 
GCGGCGGTCGTCTAGCCTGGTCTAGGACGCCGGCCTTCCAAGCCGGAGATCCCGGGTTCA
AATCCCGGCCGCCGCACCA
Downstream region at tRNA end position 
agaatagaat
Secondary structure (Cloverleaf model)
>A171001663	Gly	TCC
                   g      ACCA agaatagaat
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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