The detailed information of tRNA gene sequence


Sequence ID>A171001664
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1873614
End posion on genome 1873537
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
aatatcatct
tRNA gene sequence 
GGGCCCGTAGCTTAGCTTGGATAGAGCGCCGGCCTGCGGAGCCGGAGGTCAGGGGTTCAA
ATCCCCTCGGGCCCGCCA
Downstream region at tRNA end position 
catatgtcat
Secondary structure (Cloverleaf model)
>A171001664	Arg	GCG
                   t      GCCA catatgtcat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    T C G A        A      | | | | |     A
  T         T T C G       A G G G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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