The detailed information of tRNA gene sequence


Sequence ID>A171001667
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1428067
End posion on genome 1427994
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actacgtgaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGCGCCCGGCTCATAACCGGGTGGTCCGGGGTTCAAA
TCCCCGCGGGCCCAtaa
Downstream region at tRNA end position 
aattttgagt
Secondary structure (Cloverleaf model)
>A171001667	Met	CAT
                   a      Ataa aattttgagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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