The detailed information of tRNA gene sequence


Sequence ID>A171001673
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1183931
End posion on genome 1183855
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaatttaata
tRNA gene sequence 
GGGGCCGTAGTTTAGCTTGGTAGAATGCGGGGCTTGGGCCCCCGTGGTCCGGGGTTCAAA
TCCCCGCGGCCCCACCA
Downstream region at tRNA end position 
atcaactctt
Secondary structure (Cloverleaf model)
>A171001673	Pro	TGG
                   a      ACCA atcaactctt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    T       T T T G       C G G G G     C
    T       + | | +                 T T
    G       G A A T
      G T A        G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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