The detailed information of tRNA gene sequence


Sequence ID>A171001674
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1159463
End posion on genome 1159376
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatataaggt
tRNA gene sequence 
GCCGGGGTGCCCGAGTGGTCTAAGGGGCCGGCCTGGAGAGCCGGTGGGGGTAATCCCCAC
GCGGGTTCAAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
cacaatattt
Secondary structure (Cloverleaf model)
>A171001674	Ser	GGA
                   t      GCCA cacaatattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGGGGGTAATCCCCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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