The detailed information of tRNA gene sequence


Sequence ID>A171001695
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 2223688
End posion on genome 2223611
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcactacgta
tRNA gene sequence 
GCCCCGGTGGTATAGCCCGGTCTAGTATGGCGGCCTGTCGAGCCGCAGACCCGGGTTCAA
ATCCCGGCCGGGGCGCCA
Downstream region at tRNA end position 
gtttgcgttc
Secondary structure (Cloverleaf model)
>A171001695	Asp	GTC
                   a      GCCA gtttgcgttc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C T A        G     AGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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