The detailed information of tRNA gene sequence


Sequence ID>A171001699
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1398220
End posion on genome 1398144
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
taaatattac
tRNA gene sequence 
GGCCCCGTAGCTCAGTCAGGAAGAGCGGCGGCCTTCGGAGCCGTAGGTCGTGGGTTCAAA
TCCCACCGGGGCCGCCA
Downstream region at tRNA end position 
tcatcgataa
Secondary structure (Cloverleaf model)
>A171001699	Arg	TCG
                   c      GCCA tcatcgataa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    A       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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