The detailed information of tRNA gene sequence


Sequence ID>A171001701
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 767984
End posion on genome 767909
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gatggagata
tRNA gene sequence 
GGGCCCGTAGTCTAGCGGTTAGGATGCCCGCCTCACGCGCGGGAGATCCCGGGTTCAAAT
CCCGGCGGGCCCACCA
Downstream region at tRNA end position 
gtacggtcgt
Secondary structure (Cloverleaf model)
>A171001701	Val	CAC
                   a      ACCA gtacggtcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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