The detailed information of tRNA gene sequence


Sequence ID>A171001723
Genome IDCP002101
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosalsum zhilinae DSM 4017 [CP002101]
Start position on genome 2076193
End posion on genome 2076119
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
taactgtcga
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGACGATCCTGTAAGGCTGGGGGTCTTGCGACCGGAGTTCAA
ATCTCCGCGGCCCCAtca
Downstream region at tRNA end position 
atattttccg
Secondary structure (Cloverleaf model)
>A171001723	Pro	GGG
                   a      Atca atattttccg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C G G A G     C
  G           | | +                 T T
  G         T C C T
    A C G A        G     CGAC
                    T + G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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