The detailed information of tRNA gene sequence


Sequence ID>A171001728
Genome IDCP002101
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosalsum zhilinae DSM 4017 [CP002101]
Start position on genome 1304915
End posion on genome 1304830
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catacgaaaT
tRNA gene sequence 
GCCGAGGTAGTCTAGCGGTAAGGCGCAAGCCTGGAAAGCTTGTGGGGCTTCAGCCCCTCG
GGAGTTCGAATCCCCCCCTCGGCGTac
Downstream region at tRNA end position 
tatttttact
Secondary structure (Cloverleaf model)
>A171001728	Ser	GGA
                   T      GTac tatttttact
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | |   |     G
      C     T C T G       G G G A G     C
      G     | | + |                 T T
      G     A G G C
        T A        G     TGGGGCTTCAGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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