The detailed information of tRNA gene sequence


Sequence ID>A171001733
Genome IDCP002101
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosalsum zhilinae DSM 4017 [CP002101]
Start position on genome 1202649
End posion on genome 1202575
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatcaaataa
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACATCGCCTTTACACGGCGGGGATCCTGCGTTCGAA
TCGCAGCGGGCCCACtg
Downstream region at tRNA end position 
ttttttgaat
Secondary structure (Cloverleaf model)
>A171001733	Val	TAC
                   a      ACtg ttttttgaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C G C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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