The detailed information of tRNA gene sequence


Sequence ID>A171001786
Genome IDCP002117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanolacinia petrolearia DSM 11571 [CP002117]
Start position on genome 395894
End posion on genome 395807
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcttacctT
tRNA gene sequence 
GCTGAGGTAGTCTAGTCCGGTAGGGCGCAGGCCTGGAAAGCCTGTGGGGAATCTTCCCCT
CGGGAGTTCAAATCTCCCCCTCAGCGTtt
Downstream region at tRNA end position 
ttgttttttt
Secondary structure (Cloverleaf model)
>A171001786	Ser	GGA
                   T      GTtt ttgttttttt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       + | + |                 T T
    G       G G G C
      G T A        G     TGGGGAATCTTCCCCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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