The detailed information of tRNA gene sequence


Sequence ID>A171001792
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 199599
End posion on genome 199673
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaataaaat
tRNA gene sequence 
GGGCCGGTGGTCTAGTGGCCTAGGATGCCTCCCTGACGAGGAGGTGGTCGCGAGTTCGAA
TCTCGTCCGGCCCACtt
Downstream region at tRNA end position 
gccgtggtag
Secondary structure (Cloverleaf model)
>A171001792	Val	GAC
                   t      ACtt gccgtggtag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C T C     A
      T G A        G      + | | | |     G
    G       T C T G       G C G A G     C
    G       + | | +                 T T
    C       G G A T
      C T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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