The detailed information of tRNA gene sequence


Sequence ID>A171001795
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 434593
End posion on genome 434667
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcccataagt
tRNA gene sequence 
GGGTCCGTGGTCTAGTGGCCTAGGACGCCTCGCTCACGACGAGGAGGTCGCGAGTTCGAA
TCTCGCCGGACCCACtc
Downstream region at tRNA end position 
taacttcttt
Secondary structure (Cloverleaf model)
>A171001795	Val	CAC
                   t      ACtc taacttcttt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       T C T G       G C G A G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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