The detailed information of tRNA gene sequence


Sequence ID>A171001796
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 476069
End posion on genome 476141
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccgaggtgaA
tRNA gene sequence 
GCCGAGGTAGCTTAGGGGCAAAGCGGCGGACTGCAGATCCGCTGACGTGAGTTCAAATCT
CACCCTCGGCTTta
Downstream region at tRNA end position 
aatttttctt
Secondary structure (Cloverleaf model)
>A171001796	Cys	GCA
                   A      TTta aatttttctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
        G A        A      | | | | |     A
      G     T T C G       G T G A G     C
      G     | | | |                 T T
      G     A A G C
        C A        G     TGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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