The detailed information of tRNA gene sequence


Sequence ID>A171001810
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 984571
End posion on genome 984496
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tctatctgta
tRNA gene sequence 
GGGCCCGTGGCCTAGCCTGGATAGGGCGTCGGACTTCTAATCCGAAGATCGCGGGTTCAA
ATCCCGCCGGGTCCGCta
Downstream region at tRNA end position 
cttccttttt
Secondary structure (Cloverleaf model)
>A171001810	Arg	TCT
                   a      GCta cttccttttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     A
  T         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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