The detailed information of tRNA gene sequence


Sequence ID>A171001814
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 638960
End posion on genome 638886
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgagttaaa
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGTCTATCCTTTGGGCTTTGGGAGCCTGAGACCCCGGTTCAA
ATCCGGGTGGCCCCAtaa
Downstream region at tRNA end position 
aaaatctctt
Secondary structure (Cloverleaf model)
>A171001814	Pro	TGG
                   a      Ataa aaaatctctt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
    C C G A        A      | | | | |     A
  T         T G G G       C C C G G     C
  G           | | +                 T T
  G         T C C T
    T C T A        T     AGAC
                    T + G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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