The detailed information of tRNA gene sequence


Sequence ID>A171001817
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 624294
End posion on genome 624207
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaatagaT
tRNA gene sequence 
GCCGGGGTAGCCTAGCCAGGTAAGGCGCGGGACTTGAGATCCCGTGGGGCATACGCCCCT
CCTGGGTTCAAATCCCAGCCCCGGCGTgt
Downstream region at tRNA end position 
cgggatagcc
Secondary structure (Cloverleaf model)
>A171001817	Ser	TGA
                   T      GTgt cgggatagcc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C T G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TGGGGCATACGCCCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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