The detailed information of tRNA gene sequence


Sequence ID>A171001818
Genome IDCP002278
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermus fervidus DSM 2088 [CP002278]
Start position on genome 624207
End posion on genome 624120
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccccggcgT
tRNA gene sequence 
GTCGGGATAGCCTAGCCAGGTAAGGCGCAGGATTCGAAATCCTGTTGAGCAATGCTCATC
TTGGGTTCAAATCCCAATCCCGGCGTCa
Downstream region at tRNA end position 
actatttctc
Secondary structure (Cloverleaf model)
>A171001818	Ser	CGA
                   T      GTCa actatttctc
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     A A C C C     A
      C G A        A      | | | | |     A
    C       T C C G       T T G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TTGAGCAATGCTCATC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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