The detailed information of tRNA gene sequence


Sequence ID>A171001862
Genome IDCP002372
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus MP [CP002372]
Start position on genome 207834
End posion on genome 207920
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taataaccgt
tRNA gene sequence 
GCCGCGGTAGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGGCGTGGTCCCTCC
GGGGTTCAAATCCCCGCCGCGGCGCCA
Downstream region at tRNA end position 
gccttgcttc
Secondary structure (Cloverleaf model)
>A171001862	Ser	GCT
                   t      GCCA gccttgcttc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGGCGTGGTCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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