The detailed information of tRNA gene sequence


Sequence ID>A171001888
Genome IDCP002372
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus MP [CP002372]
Start position on genome 1054065
End posion on genome 1053989
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agaagttcga
tRNA gene sequence 
GGGCCCGTAGCCTAGCAGGATAGGGCGCCGGCCTTCTAAGCCGGAGGTCGCGGGTTCGAA
TCCCGCCGGGCCCGCCA
Downstream region at tRNA end position 
caacgaaaga
Secondary structure (Cloverleaf model)
>A171001888	Arg	TCT
                   a      GCCA caacgaaaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    A       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      A T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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