The detailed information of tRNA gene sequence


Sequence ID>A171001898
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 379023
End posion on genome 379098
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttgggaggga
tRNA gene sequence 
GGGCTCGTAGCGTAGTCAGGATATCGCGGTGGCCTCCGGAGCCGCAGATCCTGGGTTCGA
ATCCCAGCGAGCCCGCta
Downstream region at tRNA end position 
ccttttttct
Secondary structure (Cloverleaf model)
>A171001898	Arg	CCG
                   a      GCta ccttttttct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C C C     A
    C T G A        A      | | | | |     G
  A         T G C G       C T G G G     C
  G           | | |                 T T
  G         T C G C
    A T A          G     AGATC
                    G - C
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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