The detailed information of tRNA gene sequence


Sequence ID>A171001902
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 1438456
End posion on genome 1438531
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gactgtccgg
tRNA gene sequence 
GCTCCGGTGGTGTAGTCCGGTTAAGCATTTCGCCCTCTCAAGGCGGAGATCCCGGGTTCA
AATCCCGGCCGGAGCAttc
Downstream region at tRNA end position 
ttttctccca
Secondary structure (Cloverleaf model)
>A171001902	Glu	CTC
                   g      Attc ttttctccca
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A A        T     AGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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