The detailed information of tRNA gene sequence


Sequence ID>A171001908
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 2282636
End posion on genome 2282552
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagcgggct
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGCAGGGCGTGGGATTGCTAATCCCATGTCCGAAAGGACACG
TGGGTTCGAATCCCACTCCCCGCGCtc
Downstream region at tRNA end position 
tacttttgga
Secondary structure (Cloverleaf model)
>A171001908	Ser	GCT
                   t      GCtc tacttttgga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G C A        G     TGTCCGAAAGGACAC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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