The detailed information of tRNA gene sequence


Sequence ID>A171001990
Genome IDCP002535
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis W1 [CP002535]
Start position on genome 617916
End posion on genome 617990
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tgttgttttg
tRNA gene sequence 
GCTCAGGTAGCTCAGCCAGGGAGAGCGCTGGGCTGTGGACCCAGTGGTCCCGGGTTCAAA
TCCCGGCCTGAGCCCtt
Downstream region at tRNA end position 
attttacgtt
Secondary structure (Cloverleaf model)
>A171001990	His	GTG
                   g      CCtt attttacgtt
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G G A        G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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