The detailed information of tRNA gene sequence


Sequence ID>A171001994
Genome IDCP002535
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis W1 [CP002535]
Start position on genome 757255
End posion on genome 757331
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aataaaaaaT
tRNA gene sequence 
GGGCCCGTAGTCTAGCCTGGTTAGGACGCTGCCCTTACGAGGCAGAAATCCTGGGTTCAA
ATCCCAGCGGGCCCATtg
Downstream region at tRNA end position 
tagggatacc
Secondary structure (Cloverleaf model)
>A171001994	Val	TAC
                   T      ATtg tagggatacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C T G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AAATC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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