The detailed information of tRNA gene sequence


Sequence ID>A171002008
Genome IDCP002535
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis W1 [CP002535]
Start position on genome 1404657
End posion on genome 1404584
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttggaaatat
tRNA gene sequence 
GCCCCCGTAGGCCAGCAAGGTAGACCACCGGCCTGCAGAGCCGGTTGTCGCAGGTTCGAG
TCCTGCCGGGGGCTtta
Downstream region at tRNA end position 
cattatatga
Secondary structure (Cloverleaf model)
>A171002008	Cys	GCA
                   t      Ttta cattatatga
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    A       C C G G       G C A G G     C
    A       |   | |                 T T
    G       G A C C
      G T A        A     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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