The detailed information of tRNA gene sequence


Sequence ID>A171002014
Genome IDCP002535
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus hospitalis W1 [CP002535]
Start position on genome 606836
End posion on genome 606761
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cttgtaaaag
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGATAGGACGCTGCCCTGACGCGGCAGTAATCCTGGGTTCAA
ATCCCAGCGGGCCCACtt
Downstream region at tRNA end position 
tgaggttata
Secondary structure (Cloverleaf model)
>A171002014	Val	GAC
                   g      ACtt tgaggttata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C T G G G     C
  G         + | | |                 T T
  G         G G A C
    A T A          G     TAATC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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