The detailed information of tRNA gene sequence


Sequence ID>A171002020
Genome IDCP002551
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium lacus AL-21 [CP002551]
Start position on genome 238045
End posion on genome 238116
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatctactat
tRNA gene sequence 
GCCAAGGTAGCTTAGCGGCGAAGCGGTGGACTGCAGATCCATTACACGGGAGTTCAAATC
TCTCCCTTGGCTtgg
Downstream region at tRNA end position 
aaaattaaat
Secondary structure (Cloverleaf model)
>A171002020	Cys	GCA
                   t      Ttgg aaaattaaat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
        G A        A      | + | | |     A
      C     T T C G       G G G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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