The detailed information of tRNA gene sequence


Sequence ID>A171002143
Genome IDCP002656
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera cuprina Ar-4 [CP002656]
Start position on genome 1833269
End posion on genome 1833345
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agtaaggaaT
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGACGCTGGCCTTACAAGCCAGAGGTCTTGGGTTCAA
ATCCCAACGGGCCCATta
Downstream region at tRNA end position 
aattgttcaa
Secondary structure (Cloverleaf model)
>A171002143	Val	TAC
                   T      ATta aattgttcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A A C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       T T G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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