The detailed information of tRNA gene sequence


Sequence ID>A171002195
Genome IDCP002670
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus sp. NA2 [CP002670]
Start position on genome 194147
End posion on genome 194061
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagggtgtat
tRNA gene sequence 
GCCGGGATAGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCCGTGGGCGTTTGCCCGCC
GGGGTTCAAATCCCCGTCCCGGCGCCA
Downstream region at tRNA end position 
gaattattat
Secondary structure (Cloverleaf model)
>A171002195	Ser	TGA
                   t      GCCA gaattattat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGGCGTTTGCCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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