The detailed information of tRNA gene sequence


Sequence ID>A171002243
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 875537
End posion on genome 875614
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gacttcatgT
tRNA gene sequence 
GGGCCCGTAGCTCAGACTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGCCCCGGGTTCAAA
TCCCGGTGGGTCCATCC
Downstream region at tRNA end position 
tttattttat
Secondary structure (Cloverleaf model)
>A171002243	Ala	TGC
                   T      ATCC tttattttat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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