The detailed information of tRNA gene sequence


Sequence ID>A171002244
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 1086162
End posion on genome 1086232
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggactttttt
tRNA gene sequence 
GCCGAGATGACCGAGAGGCGAGGTGCATGGCTGCAAACCATGATACTTGGGTTCAAATCC
CAATCTCGGCCtca
Downstream region at tRNA end position 
tattatttta
Secondary structure (Cloverleaf model)
>A171002244	Cys	GCA
                   t      Ctca tattatttta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A A C C C     A
        G A        G      | | | | |     A
      A     G C C A       T T G G G     C
      G       | | |                 T T
      G     A G G T
        C G        G     ATAC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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