The detailed information of tRNA gene sequence


Sequence ID>A171002245
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 1160151
End posion on genome 1160224
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acttttttat
tRNA gene sequence 
GCCTCGGTGGCTCAGTCTGGTAGAGCGCGTGACTCGTAATCTCGTGGTCGTGGGTTCAAT
TCCCACCCGAGGCTttt
Downstream region at tRNA end position 
aaacttgata
Secondary structure (Cloverleaf model)
>A171002245	Thr	CGT
                   t      Tttt aaacttgata
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T T
                    T     C A C C C     A
      T G A        G      | | | | |     A
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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