The detailed information of tRNA gene sequence


Sequence ID>A171002263
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 1737976
End posion on genome 1737893
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttaatttT
tRNA gene sequence 
GCCCATGTGGCTCAGTGGTACAGCGCCAGGTTGCTAACCTGGTGATCGTTAGATCTCACA
GGTTCAAATCCTGTCATGGGCGTta
Downstream region at tRNA end position 
atttttcaac
Secondary structure (Cloverleaf model)
>A171002263	Ser	GCT
                   T      GTta atttttcaac
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
        G A        G      | | | | |     A
      T     C T C G       A C A G G     C
      G       | | |                 T T
      G     C A G C
        T A        G     TGATCGTTAGATCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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