The detailed information of tRNA gene sequence


Sequence ID>A171002264
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 1659247
End posion on genome 1659162
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaatttatt
tRNA gene sequence 
GTCGGGGTGGCCCAGCCTGGTACGGCGGTGGCCTGCTAAGCCACTGATCCTTTGGATCAC
CCGGGTTCAAATCCCGGCCCCGGCGCtt
Downstream region at tRNA end position 
agttttaact
Secondary structure (Cloverleaf model)
>A171002264	Ser	GCT
                   t      GCtt agttttaact
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       C C C G       C C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGATCCTTTGGATCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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