The detailed information of tRNA gene sequence


Sequence ID>A171002265
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 1566428
End posion on genome 1566343
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttttcttat
tRNA gene sequence 
GCCGGGATAGTCTAGCCTGGTAGGGCGCAAGACTGGAAATCTTGTGGAGCTTTGCTCCTC
CTGGGTTCAAATCCCAGTCCCGGCGCtt
Downstream region at tRNA end position 
atacaacata
Secondary structure (Cloverleaf model)
>A171002265	Ser	GGA
                   t      GCtt atacaacata
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    T       + | + |                 T T
    G       G G G C
      G T A        G     TGGAGCTTTGCTCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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