The detailed information of tRNA gene sequence


Sequence ID>A171002266
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 1206541
End posion on genome 1206466
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
agaatattaT
tRNA gene sequence 
GGGCCGGTAGCACAGTCTGGCAGTGCGCAGGACTCTTAATCCTGTCATCGAGGGTTCAAA
TCCCTCTCGGCCCGTtt
Downstream region at tRNA end position 
gtttaagata
Secondary structure (Cloverleaf model)
>A171002266	Lys	CTT
                   T      GTtt gtttaagata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    C       C A C G       G A G G G     C
    T       | | | |                 T T
    G       G T G C
      G C A        G     TCATC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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