The detailed information of tRNA gene sequence


Sequence ID>A171002274
Genome IDCP002772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium paludis SWAN1 [CP002772]
Start position on genome 497405
End posion on genome 497333
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtagtttaca
tRNA gene sequence 
GGGCTGGTAGCTCAGGAGGTAGAGCGTCGCCTTGGCATGGCGGAGGCCCCGGGTTCAAAT
CCCGGCCAGTCCAtta
Downstream region at tRNA end position 
attttaactt
Secondary structure (Cloverleaf model)
>A171002274	Ala	GGC
                   a      Atta attttaactt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      G G A        A      | | | | |     A
    A       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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