The detailed information of tRNA gene sequence


Sequence ID>A171002279
Genome IDCP002779
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus yayanosii CH1 [CP002779]
Start position on genome 181224
End posion on genome 181301
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaactccggc
tRNA gene sequence 
GGGCCCGTGGTCTAGACTGGTTATGACGCCGCCCTCACAAGGCGGAGGTCCGGGGTTCGA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
actcttctgg
Secondary structure (Cloverleaf model)
>A171002279	Val	CAC
                   c      ACCA actcttctgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C A G A        G      | | | | |     G
  T         T C T G       C G G G G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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