The detailed information of tRNA gene sequence


Sequence ID>A171002324
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 312029
End posion on genome 312116
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtggtaataT
tRNA gene sequence 
GCGGAGGTGGCCCAGTCTGGTACGGCGCGGGACTGCTAATCCCGTTGGGCTTTGCCCAAC
CCGAGTTCAAATCTCGGCCTCCGCGTCa
Downstream region at tRNA end position 
tactttttta
Secondary structure (Cloverleaf model)
>A171002324	Ser	GCT
                   T      GTCa tactttttta
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C T C     A
      T G A        G      | | | | |     A
    C       C C C G       C C G A G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TTGGGCTTTGCCCAAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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