The detailed information of tRNA gene sequence


Sequence ID>A171002327
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 381315
End posion on genome 381390
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tatataaatT
tRNA gene sequence 
GGGCTGGTAGATCAGACTGGGAGATCGCCGCATTGGCTATGCGGAGGCCGCGGGTTCAAA
TCCCGCCCAGTCCATtt
Downstream region at tRNA end position 
ttatttttag
Secondary structure (Cloverleaf model)
>A171002327	Ala	GGC
                   T      ATtt ttatttttag
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        A      | | | | |     A
    C       C T A G       G C G G G     C
    T       | | | |                 T T
    G       G A T C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       T
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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