The detailed information of tRNA gene sequence


Sequence ID>A171002337
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 1030765
End posion on genome 1030679
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaatttttT
tRNA gene sequence 
GCAGAGGTAGTCTAGCTCGGAAAGGCGTGGGACTGGAAATCCCATGGGGCTTTGCCCCTC
GGGGGTTCAAATCCCCCCCTCTGCGTgt
Downstream region at tRNA end position 
tttatttttt
Secondary structure (Cloverleaf model)
>A171002337	Ser	GGA
                   T      GTgt tttatttttt
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       T C T G       G G G G G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGGGCTTTGCCCCTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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