The detailed information of tRNA gene sequence


Sequence ID>A171002344
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 716916
End posion on genome 716842
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctgaggacT
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGCCGTGGGTTCAAAT
CCCGCCGGGTCCATag
Downstream region at tRNA end position 
cgaggttcat
Secondary structure (Cloverleaf model)
>A171002344	Ala	TGC
                   T      ATag cgaggttcat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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