The detailed information of tRNA gene sequence


Sequence ID>A171002345
Genome IDCP002792
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [CP002792]
Start position on genome 694167
End posion on genome 694079
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taggttaagt
tRNA gene sequence 
GCGGAGGTGGTCGAGCCTGGACTATGGCGCCGGACTTGAAATCCGGTGAGGCTTTGCCTC
GCAAGGGTTCAAATCCCTTCCTCCGCGCCt
Downstream region at tRNA end position 
tttattttag
Secondary structure (Cloverleaf model)
>A171002345	Ser	TGA
                   t      GCCt tttattttag
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      | | | | |     A
  T         G C T G       A A G G G     C
  G         + | + |                 T T
  G         T G G C
    A C T A        G     TGAGGCTTTGCCTCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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